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RBM3

From Wikipedia, the free encyclopedia
RBM3
Identifiers
AliasesRBM3, IS1-RNPL, RNPL, RNA binding motif (RNP1, RRM) protein 3, RNA binding motif protein 3
External IDsOMIM: 300027; MGI: 3642874; HomoloGene: 31404; GeneCards: RBM3; OMA:RBM3 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001017430
NM_001017431
NM_006743

XM_036156140

RefSeq (protein)

NP_006734

n/a

Location (UCSC)Chr X: 48.57 – 48.58 Mbn/a
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Putative RNA-binding protein 3 is a protein that in humans is encoded by the RBM3 gene.[4][5]

Function

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This gene is a member of the glycine-rich RNA-binding protein family and encodes a protein with one RNA recognition motif (RRM) domain. Expression of this gene is induced by cold shock and low oxygen tension. A pseudogene exists on chromosome 1. Alternate transcriptional splice variants, encoding different isoforms, have been characterized.[5] RBM3 contains a poison exon whose inclusion is lowered during hypothermia.[6]

RBM3 is cold-induced RNA binding protein and is involved in mRNA biogenesis exerts anti-apoptotic effects.[7] According to antibody-based profiling and transcriptomics analysis, RBM3 protein is present in all analysed human tissues[8] and based on confocal microscopy mainly localised to the nucleoplasm.[9]

Clinical significance

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RBM3 is a proto-oncogene that is associated with tumor progression and metastasis and is a potential cancer biomarker.[7] Based on patient survival data, high levels of RBM3 protein in tumor cells is a favourable prognostic biomarker in colorectal cancer.[10]

References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000102317Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ Derry JM, Kerns JA, Francke U (December 1995). "RBM3, a novel human gene in Xp11.23 with a putative RNA-binding domain". Human Molecular Genetics. 4 (12): 2307–11. doi:10.1093/hmg/4.12.2307. PMID 8634703.
  5. ^ a b "Entrez Gene: RBM3 RNA binding motif (RNP1, RRM) protein 3".
  6. ^ Lin, Julie Qiaojin; Khuperkar, Deepak; Pavlou, Sofia; Makarchuk, Stanislaw; Patikas, Nikolaos; Lee, Flora CY; Zbiegly, Julia M; Kang, Jianning; Field, Sarah F; Bailey, David MD; Freeman, Joshua L; Ule, Jernej; Metzakopian, Emmanouil; Ruepp, Marc‐David; Mallucci, Giovanna R (2023-07-17). "HNRNPH1 regulates the neuroprotective cold‐shock protein RBM3 expression through poison exon exclusion". The EMBO Journal. 42 (14). doi:10.15252/embj.2022113168. ISSN 0261-4189.
  7. ^ a b Zhou RB, Lu XL, Zhang CY, Yin DC (March 2017). "RNA binding motif protein 3: a potential biomarker in cancer and therapeutic target in neuroprotection". Oncotarget. 8 (13): 22235–22250. doi:10.18632/oncotarget.14755. PMC 5400660. PMID 28118608.
  8. ^ "Tissue expression of RBM3 - Summary". The Human Protein Atlas.
  9. ^ "Cell atlas - RBM3". The Human Protein Atlas.
  10. ^ "Expression of RBM3 in cancer - Summary". The Human Protein Atlas.

Further reading

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